Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8610 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1316875 bp
Thymine Count
1319196 bp
Guanine Count
1364458 bp
Cytosine Count
1357555 bp
Genome Length
5358214 bp
Protein-coding Genes
5208 genes
Non-Coding Genes
229 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FIC06_27275 | Not Available | Positive | 5297469 - 5297688 | 8425.0 |
| cell wall-binding protein | FIC06_27280 | Not Available | Negative | 5297739 - 5298037 | 10970.0 |
| conjugative coupling factor trad, pfgi-1 class | FIC06_27285 | Not Available | Negative | 5298038 - 5298604 | 20711.9 |
| restriction endonuclease | FIC06_27290 | Not Available | Negative | 5298605 - 5298671 | 2177.44 |
| duf945 domain-containing protein | FIC06_27295 | Not Available | Negative | 5298763 - 5299170 | 15327.4 |
| type 1 fimbriae regulatory protein fime | FIC06_27300 | Not Available | Negative | 5299171 - 5299685 | 20106.1 |
| tigr03752 family integrating conjugative element protein | FIC06_27305 | Not Available | Positive | 5299733 - 5300275 | 18652.7 |
| exonuclease | FIC06_27310 | Not Available | Positive | 5300276 - 5300817 | 20012.8 |
| pas domain-containing protein | FIC06_27315 | Not Available | Negative | 5300818 - 5301254 | 16721.7 |
| rhs repeat protein | FIC06_27325 | Not Available | Positive | 5301889 - 5302422 | 19862.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





