Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8610 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1316875 bp
Thymine Count
1319196 bp
Guanine Count
1364458 bp
Cytosine Count
1357555 bp
Genome Length
5358214 bp
Protein-coding Genes
5208 genes
Non-Coding Genes
229 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FIC06_25740 | Not Available | Negative | 5085448 - 5085654 | 7773.3 |
| duf1391 domain-containing protein | FIC06_25745 | Not Available | Negative | 5085823 - 5085969 | 5492.38 |
| helix-turn-helix domain-containing protein | FIC06_25750 | Not Available | Negative | 5086138 - 5086527 | 14710.5 |
| helix-turn-helix domain-containing protein | FIC06_25755 | Not Available | Positive | 5086631 - 5086906 | 9919.78 |
| rha family transcriptional regulator | FIC06_25760 | Not Available | Positive | 5086890 - 5087058 | 6508.74 |
| hypothetical protein | FIC06_25765 | Not Available | Negative | 5087175 - 5087744 | 21996.6 |
| rhs repeat protein | FIC06_25770 | Not Available | Negative | 5087741 - 5089461 | 65853.1 |
| hypothetical protein | FIC06_25775 | Not Available | Positive | 5089793 - 5090221 | 16281.5 |
| relaxase | FIC06_25780 | Not Available | Positive | 5090190 - 5091359 | 43760.9 |
| hypothetical protein | FIC06_25785 | Not Available | Positive | 5091583 - 5091787 | 7539.25 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





