Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8610 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1316875 bp
Thymine Count
1319196 bp
Guanine Count
1364458 bp
Cytosine Count
1357555 bp
Genome Length
5358214 bp
Protein-coding Genes
5208 genes
Non-Coding Genes
229 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| escs/yscs/hrcs family type iii secretion system export apparatus protein | FIC06_25320 | Not Available | Negative | 5009405 - 5009665 | 9430.85 |
| escr/yscr/hrcr family type iii secretion system export apparatus protein | FIC06_25325 | Not Available | Negative | 5009675 - 5009878 | 7451.71 |
| peptidoglycan editing factor pgef | FIC06_25330 | Not Available | Positive | 5009879 - 5010050 | 6629.84 |
| atp-dependent chaperone clpb | FIC06_25335 | Not Available | Positive | 5010180 - 5012753 | 95606.8 |
| Trna-gly | Not Available | Not Available | Positive | 5013320 - 5013391 | Not Available |
| hypothetical protein | FIC06_25345 | Not Available | Positive | 5013796 - 5014287 | 18621.0 |
| tellurite/colicin resistance protein | FIC06_25350 | Not Available | Positive | 5014485 - 5014910 | 15309.3 |
| duf3927 domain-containing protein | FIC06_25355 | Not Available | Positive | 5014907 - 5015065 | 5586.21 |
| duf4145 domain-containing protein | FIC06_25360 | Not Available | Negative | 5015100 - 5015897 | 30598.9 |
| holin | FIC06_25365 | Not Available | Positive | 5016081 - 5016239 | 5293.42 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





