Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8610 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1316875 bp
Thymine Count
1319196 bp
Guanine Count
1364458 bp
Cytosine Count
1357555 bp
Genome Length
5358214 bp
Protein-coding Genes
5208 genes
Non-Coding Genes
229 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane protein ypdk | FIC06_24975 | Not Available | Positive | 4963664 - 4963735 | 2704.57 |
| alanine transaminase | FIC06_24980 | Not Available | Negative | 4963800 - 4965038 | 46218.8 |
| integrase | FIC06_24985 | Not Available | Positive | 4965337 - 4965549 | 7951.57 |
| res domain-containing protein | FIC06_24990 | Not Available | Negative | 4965691 - 4966716 | 38174.5 |
| sce7725 family protein | FIC06_24995 | Not Available | Negative | 4966718 - 4967650 | 35019.6 |
| sce7726 family protein | FIC06_25000 | Not Available | Negative | 4967657 - 4968559 | 33854.1 |
| site-specific dna-methyltransferase | FIC06_25005 | Not Available | Negative | 4968801 - 4970069 | 47877.4 |
| copper resistance protein | FIC06_25025 | Not Available | Positive | 4971955 - 4972071 | 4180.81 |
| conjugal transfer protein trbe | FIC06_25040 | Not Available | Negative | 4972392 - 4972602 | 7878.98 |
| type-f conjugative transfer system mating-pair stabilization protein tran | FIC06_25045 | Not Available | Negative | 4972629 - 4974416 | 65203.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





