Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8610 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1316875 bp
Thymine Count
1319196 bp
Guanine Count
1364458 bp
Cytosine Count
1357555 bp
Genome Length
5358214 bp
Protein-coding Genes
5208 genes
Non-Coding Genes
229 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gaba permease | FIC06_23745 | Not Available | Negative | 4781848 - 4783248 | 51097.1 |
| 4-aminobutyrate--2-oxoglutarate transaminase | FIC06_23750 | Not Available | Negative | 4783559 - 4784839 | 45690.3 |
| aldehyde dehydrogenase family protein | FIC06_23755 | Not Available | Negative | 4784853 - 4785025 | 5917.18 |
| conjugal transfer protein tras | FIC06_23760 | Not Available | Negative | 4785026 - 4785224 | 7653.63 |
| conjugal transfer protein trag | FIC06_23765 | Not Available | Negative | 4785221 - 4788067 | 103620.0 |
| conjugal transfer protein trah | FIC06_23770 | Not Available | Negative | 4788064 - 4789437 | 50517.6 |
| conjugal transfer protein trbf | FIC06_23775 | Not Available | Negative | 4789424 - 4789849 | 16991.0 |
| p-type conjugative transfer protein trbj | FIC06_23780 | Not Available | Negative | 4789770 - 4790144 | 13856.2 |
| type-f conjugative transfer system pilin assembly thiol-disulfide isomerase trbb | FIC06_23785 | Not Available | Negative | 4790074 - 4790619 | 19814.1 |
| type-f conjugative transfer system pilin chaperone traq | FIC06_23790 | Not Available | Negative | 4790606 - 4790890 | 10836.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





