Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8610 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1316875 bp
Thymine Count
1319196 bp
Guanine Count
1364458 bp
Cytosine Count
1357555 bp
Genome Length
5358214 bp
Protein-coding Genes
5208 genes
Non-Coding Genes
229 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fkbp-type peptidyl-prolyl cis-trans isomerase | FIC06_23330 | Not Available | Negative | 4712864 - 4713676 | 28913.4 |
| protein slyx | FIC06_23335 | Not Available | Positive | 4713898 - 4714116 | 8214.8 |
| mfs transporter tsga | FIC06_23340 | Not Available | Positive | 4714167 - 4715078 | 33264.4 |
| nitrite reductase large subunit | FIC06_23345 | Not Available | Positive | 4715340 - 4717883 | 93112.6 |
| nitrite reductase small subunit nird | FIC06_23350 | Not Available | Positive | 4717880 - 4718206 | 12284.7 |
| nitrite transporter nirc | FIC06_23355 | Not Available | Positive | 4718333 - 4719139 | 28565.1 |
| uroporphyrinogen-iii c-methyltransferase | FIC06_23360 | Not Available | Positive | 4719158 - 4720531 | 49954.4 |
| duf4223 domain-containing protein | FIC06_23365 | Not Available | Positive | 4720778 - 4720945 | 5819.16 |
| long-chain fatty acid transporter fadl | FIC06_23370 | Not Available | Negative | 4721278 - 4722618 | 48513.0 |
| duf406 family protein | FIC06_23375 | Not Available | Positive | 4722990 - 4723274 | 10291.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





