Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8610 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1316875 bp
Thymine Count
1319196 bp
Guanine Count
1364458 bp
Cytosine Count
1357555 bp
Genome Length
5358214 bp
Protein-coding Genes
5208 genes
Non-Coding Genes
229 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is1 encoded protein | FIC06_22975 | Not Available | Negative | 4650840 - 4650932 | 3385.99 |
| type vi secretion system protein tssa | FIC06_22985 | Not Available | Negative | 4651499 - 4653097 | 59026.6 |
| type vi secretion protein vask | FIC06_22990 | Not Available | Negative | 4653097 - 4656486 | 127441.0 |
| type vi secretion protein | FIC06_22995 | Not Available | Negative | 4656479 - 4657573 | 40979.4 |
| paar domain-containing protein | FIC06_23000 | Not Available | Negative | 4657631 - 4657897 | 8878.85 |
| duf2931 family protein | FIC06_23005 | Not Available | Negative | 4657929 - 4658133 | 7473.96 |
| ncs2 family permease | FIC06_23010 | Not Available | Positive | 4658202 - 4659536 | 46940.5 |
| duf1198 domain-containing protein | FIC06_23015 | Not Available | Positive | 4659589 - 4660041 | 17220.1 |
| purine ribonucleoside efflux pump nepi | FIC06_23020 | Not Available | Positive | 4660252 - 4661442 | 41878.5 |
| hypothetical protein | FIC06_23025 | Not Available | Negative | 4661483 - 4661776 | 11070.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





