Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8610 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1316875 bp
Thymine Count
1319196 bp
Guanine Count
1364458 bp
Cytosine Count
1357555 bp
Genome Length
5358214 bp
Protein-coding Genes
5208 genes
Non-Coding Genes
229 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FIC06_22150 | Not Available | Negative | 4496005 - 4496220 | 8080.97 |
| dna phosphorothioation-dependent restriction protein dptf | FIC06_22155 | Not Available | Positive | 4496737 - 4497741 | 38421.0 |
| dna phosphorothioation-dependent restriction protein dptg | FIC06_22160 | Not Available | Positive | 4497746 - 4499071 | 51336.4 |
| dna phosphorothioation-dependent restriction protein dpth | FIC06_22165 | Not Available | Positive | 4499052 - 4504124 | 192265.0 |
| duf262 domain-containing protein | FIC06_22170 | Not Available | Positive | 4504114 - 4504832 | 27704.1 |
| l-rhamnose mutarotase | FIC06_22175 | Not Available | Negative | 4504833 - 4505084 | 10063.9 |
| rhamnulose-1-phosphate aldolase | FIC06_22180 | Not Available | Negative | 4505094 - 4505918 | 30057.1 |
| l-rhamnose isomerase | FIC06_22185 | Not Available | Negative | 4506160 - 4507419 | 47145.9 |
| rhamnulokinase | FIC06_22190 | Not Available | Negative | 4507416 - 4508885 | 54054.1 |
| hth-type transcriptional activator rhas | FIC06_22195 | Not Available | Positive | 4509173 - 4510009 | 32331.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





