Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8610 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1316875 bp
Thymine Count
1319196 bp
Guanine Count
1364458 bp
Cytosine Count
1357555 bp
Genome Length
5358214 bp
Protein-coding Genes
5208 genes
Non-Coding Genes
229 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two-component response regulator dpia | FIC06_21540 | Not Available | Negative | 4382458 - 4383138 | 25454.9 |
| sensor histidine kinase dpib | FIC06_21545 | Not Available | Negative | 4383107 - 4384765 | 61659.7 |
| cold shock-like protein cspb | FIC06_21550 | Not Available | Negative | 4385107 - 4385322 | 7745.18 |
| antitermination protein | FIC06_21560 | Not Available | Negative | 4385998 - 4386750 | 28043.9 |
| duf968 domain-containing protein | FIC06_21565 | Not Available | Negative | 4386764 - 4387252 | 18402.2 |
| transcriptional regulator | FIC06_21570 | Not Available | Negative | 4387236 - 4387463 | 8267.9 |
| helix-turn-helix domain-containing protein | FIC06_21575 | Not Available | Positive | 4387544 - 4387951 | 15511.7 |
| duf1391 domain-containing protein | FIC06_21580 | Not Available | Positive | 4388120 - 4388275 | 5705.6 |
| hypothetical protein | FIC06_21585 | Not Available | Positive | 4388277 - 4388852 | 22307.3 |
| cell division inhibition protein dicb | FIC06_21590 | Not Available | Positive | 4389339 - 4389527 | 6964.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





