Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8610 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1316875 bp
Thymine Count
1319196 bp
Guanine Count
1364458 bp
Cytosine Count
1357555 bp
Genome Length
5358214 bp
Protein-coding Genes
5208 genes
Non-Coding Genes
229 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carnitine metabolism transcriptional regulator caif | FIC06_21315 | Not Available | Negative | 4341823 - 4342218 | 15393.0 |
| carbamoyl-phosphate synthase large subunit | FIC06_21320 | Not Available | Negative | 4342479 - 4345700 | 117877.0 |
| glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit | FIC06_21325 | Not Available | Negative | 4345718 - 4346866 | 41448.3 |
| nitrate transporter nark | FIC06_21330 | Not Available | Negative | 4347375 - 4348766 | 49696.3 |
| nitrate/nitrite two-component system sensor histidine kinase narx | FIC06_21335 | Not Available | Positive | 4349105 - 4350901 | 67059.9 |
| two-component system response regulator narl | FIC06_21340 | Not Available | Positive | 4350894 - 4351544 | 23928.3 |
| inverse autotransporter invasin ycho | FIC06_21345 | Not Available | Negative | 4351545 - 4352939 | 52089.6 |
| dsre/f sulfur relay family protein ychn | FIC06_21350 | Not Available | Positive | 4353124 - 4353477 | 12693.5 |
| gamma-glutamylcyclotransferase | FIC06_21355 | Not Available | Negative | 4353521 - 4354216 | 25585.8 |
| putative cation transport regulator chab | FIC06_21360 | Not Available | Negative | 4354374 - 4354604 | 8931.15 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





