Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8610 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1316875 bp
Thymine Count
1319196 bp
Guanine Count
1364458 bp
Cytosine Count
1357555 bp
Genome Length
5358214 bp
Protein-coding Genes
5208 genes
Non-Coding Genes
229 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| leucine-rich repeat domain-containing protein | FIC06_19810 | Not Available | Negative | 4041183 - 4041673 | 18530.9 |
| type vi secretion system contractile sheath small subunit | FIC06_19815 | Not Available | Positive | 4041714 - 4042214 | 18656.3 |
| type vi secretion system contractile sheath large subunit | FIC06_19820 | Not Available | Positive | 4042273 - 4043811 | 58020.7 |
| type vi secretion system baseplate subunit tssk | FIC06_19825 | Not Available | Positive | 4043829 - 4045166 | 49603.7 |
| dotu family type iv/vi secretion system protein | FIC06_19830 | Not Available | Positive | 4045163 - 4045828 | 25274.7 |
| ompa family protein | FIC06_19835 | Not Available | Positive | 4045841 - 4047493 | 60364.2 |
| hcp family type vi secretion system effector | FIC06_19840 | Not Available | Positive | 4047551 - 4048042 | 18647.9 |
| type vi secretion system atpase tssh | FIC06_19845 | Not Available | Positive | 4048233 - 4050878 | 97877.3 |
| type vi secretion system tip protein vgrg | FIC06_19850 | Not Available | Positive | 4050890 - 4053391 | 92568.6 |
| hypothetical protein | FIC06_19855 | Not Available | Positive | 4053378 - 4053691 | 11835.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





