Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8610 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1316875 bp
Thymine Count
1319196 bp
Guanine Count
1364458 bp
Cytosine Count
1357555 bp
Genome Length
5358214 bp
Protein-coding Genes
5208 genes
Non-Coding Genes
229 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| biotin synthase | FIC06_19660 | Not Available | Positive | 4001144 - 4002184 | 38650.3 |
| 8-amino-7-oxononanoate synthase | FIC06_19665 | Not Available | Positive | 4002181 - 4003335 | 41701.9 |
| malonyl-acp o-methyltransferase bioc | FIC06_19670 | Not Available | Positive | 4003322 - 4004077 | 28210.8 |
| atp-dependent dethiobiotin synthetase biod | FIC06_19675 | Not Available | Positive | 4004070 - 4004747 | 24121.9 |
| outer membrane usher protein fimd | FIC06_19680 | Not Available | Positive | 4004920 - 4006473 | 56885.9 |
| type 1 fimbrin d-mannose specific adhesin fimh | FIC06_19685 | Not Available | Positive | 4006486 - 4007493 | 36614.1 |
| fimbriae assembly protein | FIC06_19690 | Not Available | Positive | 4007504 - 4008019 | 18149.6 |
| fimbriae biosynthesis transcriptional regulator fimz | FIC06_19695 | Not Available | Negative | 4008022 - 4008654 | 23664.9 |
| Trna-arg | Not Available | Not Available | Positive | 4008897 - 4008973 | Not Available |
| arac family transcriptional regulator | FIC06_19705 | Not Available | Negative | 4009019 - 4009780 | 29020.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





