Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8610 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1316875 bp
Thymine Count
1319196 bp
Guanine Count
1364458 bp
Cytosine Count
1357555 bp
Genome Length
5358214 bp
Protein-coding Genes
5208 genes
Non-Coding Genes
229 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mmcq/yjbr family dna-binding protein | FIC06_18330 | Not Available | Positive | 3743168 - 3743524 | 13520.2 |
| excinuclease abc subunit uvra | FIC06_18335 | Not Available | Negative | 3743559 - 3746381 | 103874.0 |
| single-stranded dna-binding protein ssb1 | FIC06_18340 | Not Available | Positive | 3746635 - 3747171 | 18976.1 |
| hypothetical protein | FIC06_18345 | Not Available | Negative | 3747270 - 3747551 | 10304.0 |
| c-di-gmp phosphodiesterase pdec | FIC06_18350 | Not Available | Positive | 3747981 - 3749567 | 60790.8 |
| superoxide response transcriptional regulator soxs | FIC06_18355 | Not Available | Negative | 3749570 - 3749893 | 12911.6 |
| redox-sensitive transcriptional activator soxr | FIC06_18360 | Not Available | Positive | 3749979 - 3750443 | 17150.7 |
| ncs2 family permease | FIC06_18365 | Not Available | Positive | 3750989 - 3752338 | 45714.4 |
| na+/h+ antiporter | FIC06_18370 | Not Available | Positive | 3752489 - 3754138 | 60527.5 |
| pentapeptide repeat-containing protein | FIC06_18375 | Not Available | Negative | 3754292 - 3755290 | 37714.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





