Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8610 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1316875 bp
Thymine Count
1319196 bp
Guanine Count
1364458 bp
Cytosine Count
1357555 bp
Genome Length
5358214 bp
Protein-coding Genes
5208 genes
Non-Coding Genes
229 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix transcriptional regulator | FIC06_16500 | Not Available | Negative | 3364118 - 3364414 | 10842.5 |
| permease | FIC06_16505 | Not Available | Positive | 3364521 - 3365534 | 35662.2 |
| ferredoxin-type protein napf | FIC06_16510 | Not Available | Positive | 3366144 - 3366638 | 18048.3 |
| chaperone napd | FIC06_16515 | Not Available | Positive | 3366628 - 3366891 | 9469.03 |
| periplasmic nitrate reductase subunit alpha | FIC06_16520 | Not Available | Positive | 3366888 - 3369374 | 93062.0 |
| ferredoxin-type protein napg | FIC06_16525 | Not Available | Positive | 3369381 - 3370076 | 24926.1 |
| quinol dehydrogenase ferredoxin subunit naph | FIC06_16530 | Not Available | Positive | 3370063 - 3370926 | 31875.3 |
| nitrate reductase cytochrome c-type subunit | FIC06_16535 | Not Available | Positive | 3370923 - 3371372 | 16311.5 |
| cytochrome c-type protein napc | FIC06_16540 | Not Available | Positive | 3371382 - 3371984 | 23101.8 |
| cytochrome c biogenesis heme-transporting atpase ccma | FIC06_16545 | Not Available | Positive | 3372003 - 3372620 | 22866.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





