Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8610 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1316875 bp
Thymine Count
1319196 bp
Guanine Count
1364458 bp
Cytosine Count
1357555 bp
Genome Length
5358214 bp
Protein-coding Genes
5208 genes
Non-Coding Genes
229 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3811 domain-containing protein | FIC06_16280 | Not Available | Positive | 3312712 - 3312984 | 10491.6 |
| 23s rrna pseudouridine(2604) synthase rluf | FIC06_16285 | Not Available | Negative | 3312985 - 3313857 | 32464.5 |
| dipeptidase pepe | FIC06_16290 | Not Available | Positive | 3314069 - 3314758 | 24571.7 |
| na/pi cotransporter family protein | FIC06_16295 | Not Available | Negative | 3314849 - 3316480 | 59470.7 |
| methionine synthase | FIC06_16300 | Not Available | Negative | 3316700 - 3320383 | 136005.0 |
| glyoxylate bypass operon transcriptional repressor iclr | FIC06_16305 | Not Available | Positive | 3320583 - 3321407 | 29672.0 |
| bifunctional isocitrate dehydrogenase kinase/phosphatase | FIC06_16315 | Not Available | Negative | 3323266 - 3325002 | 67674.3 |
| isocitrate lyase | FIC06_16320 | Not Available | Negative | 3325283 - 3326587 | 47524.1 |
| malate synthase a | FIC06_16325 | Not Available | Negative | 3326617 - 3328218 | 60321.0 |
| homoserine o-succinyltransferase | FIC06_16330 | Not Available | Negative | 3328486 - 3329415 | 35701.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





