Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8610 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1316875 bp
Thymine Count
1319196 bp
Guanine Count
1364458 bp
Cytosine Count
1357555 bp
Genome Length
5358214 bp
Protein-coding Genes
5208 genes
Non-Coding Genes
229 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| catabolic alanine racemase dadx | FIC06_16165 | Not Available | Negative | 3291897 - 3292967 | 38872.9 |
| d-amino acid dehydrogenase | FIC06_16170 | Not Available | Negative | 3292977 - 3294248 | 46728.9 |
| duf4092 domain-containing protein | FIC06_16175 | Not Available | Positive | 3294412 - 3298977 | 167487.0 |
| prepilin peptidase | FIC06_16180 | Not Available | Positive | 3299125 - 3299934 | 29471.9 |
| hypothetical protein | FIC06_16185 | Not Available | Positive | 3300000 - 3300410 | 14700.8 |
| type ii secretion system protein gspc | FIC06_16190 | Not Available | Positive | 3300428 - 3301348 | 34435.6 |
| type ii secretion system protein gspj | FIC06_16200 | Not Available | Positive | 3301392 - 3301997 | 22404.5 |
| general secretion pathway protein gspk | FIC06_16205 | Not Available | Positive | 3301994 - 3302971 | 36544.3 |
| type ii secretion system protein gspl | FIC06_16210 | Not Available | Positive | 3302968 - 3304146 | 44223.3 |
| type ii secretion system protein | FIC06_16215 | Not Available | Positive | 3304148 - 3304684 | 20366.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





