Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8610 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1316875 bp
Thymine Count
1319196 bp
Guanine Count
1364458 bp
Cytosine Count
1357555 bp
Genome Length
5358214 bp
Protein-coding Genes
5208 genes
Non-Coding Genes
229 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribokinase | FIC06_15660 | Not Available | Negative | 3185856 - 3186785 | 32292.4 |
| ribose abc transporter substrate-binding protein rbsb | FIC06_15665 | Not Available | Negative | 3186911 - 3187801 | 30940.2 |
| ribose abc transporter permease | FIC06_15670 | Not Available | Negative | 3187826 - 3188791 | 33454.0 |
| ribose abc transporter atp-binding protein rbsa | FIC06_15675 | Not Available | Negative | 3188796 - 3190301 | 54988.0 |
| d-ribose pyranase | FIC06_15680 | Not Available | Negative | 3190309 - 3190728 | 15316.5 |
| low affinity potassium transporter kup | FIC06_15685 | Not Available | Negative | 3190895 - 3192763 | 69298.3 |
| atpase rava | FIC06_15690 | Not Available | Positive | 3192986 - 3194482 | 56419.1 |
| atpase rava stimulator viaa | FIC06_15695 | Not Available | Positive | 3194476 - 3195927 | 55880.6 |
| aspartate--ammonia ligase | FIC06_15700 | Not Available | Negative | 3195932 - 3196924 | 36692.7 |
| transcriptional regulator asnc | FIC06_15705 | Not Available | Positive | 3197076 - 3197534 | 16888.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





