Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8610 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1316875 bp
Thymine Count
1319196 bp
Guanine Count
1364458 bp
Cytosine Count
1357555 bp
Genome Length
5358214 bp
Protein-coding Genes
5208 genes
Non-Coding Genes
229 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Dna primase | FIC06_08220 | Not Available | Negative | 1700021 - 1702354 | 84818.1 |
| Hypothetical protein | FIC06_08225 | Not Available | Negative | 1702369 - 1702689 | 11802.6 |
| Hypothetical protein | FIC06_08230 | Not Available | Negative | 1702825 - 1703280 | 17727.1 |
| Helper derepression protein | FIC06_08235 | Not Available | Negative | 1703273 - 1703560 | 10937.0 |
| Putative ci repressor | FIC06_08240 | Not Available | Negative | 1703553 - 1704152 | 21239.7 |
| Transcriptional regulator | FIC06_08245 | Not Available | Negative | 1704149 - 1704415 | 9763.97 |
| Attr | Not Available | Not Available | Positive | 1704718 - 1704729 | Not Available |
| Head size determination protein sid | FIC06_08250 | Not Available | Positive | 1704968 - 1705567 | 22158.9 |
| Portal protein | FIC06_15380 | Not Available | Negative | 3125313 - 3126317 | 38058.6 |
| Terminase atpase subunit family protein | FIC06_15385 | Not Available | Negative | 3126317 - 3127108 | 29597.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





