Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8610 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1316875 bp
Thymine Count
1319196 bp
Guanine Count
1364458 bp
Cytosine Count
1357555 bp
Genome Length
5358214 bp
Protein-coding Genes
5208 genes
Non-Coding Genes
229 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system tip protein vgrg | FIC06_14330 | Not Available | Negative | 2903356 - 2905875 | 91906.9 |
| hypothetical protein | FIC06_14335 | Not Available | Negative | 2905954 - 2906181 | 8798.81 |
| hypothetical protein | FIC06_14340 | Not Available | Negative | 2906178 - 2906819 | 23451.4 |
| type vi secretion system atpase tssh | FIC06_14345 | Not Available | Negative | 2906806 - 2909493 | 99185.6 |
| hcp family type vi secretion system effector | FIC06_14350 | Not Available | Negative | 2909662 - 2910153 | 18712.0 |
| ompa family protein | FIC06_14355 | Not Available | Negative | 2910159 - 2911889 | 64376.6 |
| dotu family type iv/vi secretion system protein | FIC06_14360 | Not Available | Negative | 2911892 - 2912545 | 24486.3 |
| type vi secretion system baseplate subunit tssk | FIC06_14365 | Not Available | Negative | 2912542 - 2913879 | 49933.2 |
| type vi secretion system contractile sheath large subunit | FIC06_14370 | Not Available | Negative | 2913895 - 2915439 | 57757.7 |
| type vi secretion system contractile sheath small subunit | FIC06_14375 | Not Available | Negative | 2915461 - 2915958 | 18589.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





