Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8610 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1316875 bp
Thymine Count
1319196 bp
Guanine Count
1364458 bp
Cytosine Count
1357555 bp
Genome Length
5358214 bp
Protein-coding Genes
5208 genes
Non-Coding Genes
229 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(+) kinase | FIC06_13970 | Not Available | Negative | 2840054 - 2840932 | 32568.3 |
| nucleotide exchange factor grpe | FIC06_13975 | Not Available | Positive | 2841055 - 2841648 | 21813.1 |
| duf21 domain-containing protein | FIC06_13980 | Not Available | Negative | 2841703 - 2842989 | 48013.2 |
| inner membrane protein ypjd | FIC06_13985 | Not Available | Negative | 2843010 - 2843801 | 29263.9 |
| signal recognition particle protein | FIC06_13990 | Not Available | Positive | 2843968 - 2845329 | 49790.5 |
| 30s ribosomal protein s16 | FIC06_13995 | Not Available | Positive | 2845466 - 2845714 | 9191.08 |
| ribosome maturation factor rimm | FIC06_14000 | Not Available | Positive | 2845733 - 2846281 | 20606.6 |
| trna (guanosine(37)-n1)-methyltransferase trmd | FIC06_14005 | Not Available | Positive | 2846312 - 2847079 | 28424.0 |
| 50s ribosomal protein l19 | FIC06_14010 | Not Available | Positive | 2847121 - 2847468 | 13134.0 |
| ompa family protein | FIC06_14015 | Not Available | Negative | 2847545 - 2848027 | 17259.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





