Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8610 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1316875 bp
Thymine Count
1319196 bp
Guanine Count
1364458 bp
Cytosine Count
1357555 bp
Genome Length
5358214 bp
Protein-coding Genes
5208 genes
Non-Coding Genes
229 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| shet2/espl2 family type iii secretion system effector toxin | FIC06_12300 | Not Available | Negative | 2511613 - 2513511 | 70827.1 |
| threonine--trna ligase | FIC06_12305 | Not Available | Positive | 2514035 - 2515963 | 74018.4 |
| translation initiation factor if-3 | FIC06_12310 | Not Available | Positive | 2515967 - 2516509 | 20565.2 |
| 50s ribosomal protein l35 | FIC06_12315 | Not Available | Positive | 2516606 - 2516803 | 7289.38 |
| 50s ribosomal protein l20 | FIC06_12320 | Not Available | Positive | 2516856 - 2517212 | 13497.7 |
| phest operon leader peptide phem | FIC06_12325 | Not Available | Positive | 2517339 - 2517473 | 5349.58 |
| phenylalanine--trna ligase subunit alpha | FIC06_12330 | Not Available | Positive | 2517663 - 2518646 | 36833.9 |
| phenylalanine--trna ligase subunit beta | FIC06_12335 | Not Available | Positive | 2518661 - 2521048 | 87341.1 |
| integration host factor subunit alpha | FIC06_12340 | Not Available | Positive | 2521053 - 2521352 | 11354.6 |
| vitamin b12 abc transporter permease btuc | FIC06_12345 | Not Available | Positive | 2521453 - 2522433 | 35050.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





