Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8610 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1316875 bp
Thymine Count
1319196 bp
Guanine Count
1364458 bp
Cytosine Count
1357555 bp
Genome Length
5358214 bp
Protein-coding Genes
5208 genes
Non-Coding Genes
229 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrogenase 4 subunit hyfc | FIC06_09830 | Not Available | Negative | 2014769 - 2015713 | 34218.2 |
| hydrogenase 4 subunit hyfa | FIC06_09840 | Not Available | Negative | 2017741 - 2018358 | 22234.6 |
| thioredoxin-dependent thiol peroxidase | FIC06_09845 | Not Available | Negative | 2018611 - 2019081 | 17634.9 |
| glycine cleavage system transcriptional repressor | FIC06_09850 | Not Available | Negative | 2019081 - 2019653 | 20769.8 |
| 4-hydroxy-tetrahydrodipicolinate synthase | FIC06_09855 | Not Available | Positive | 2019799 - 2020677 | 31285.9 |
| outer membrane protein assembly factor bamc | FIC06_09860 | Not Available | Positive | 2020694 - 2021728 | 36844.5 |
| phosphoribosylaminoimidazolesuccinocarboxamide synthase | FIC06_09865 | Not Available | Positive | 2021941 - 2022654 | 26996.5 |
| antitoxin | FIC06_09870 | Not Available | Positive | 2022808 - 2023035 | 8499.05 |
| trna(fmet)-specific endonuclease vapc | FIC06_09875 | Not Available | Positive | 2023035 - 2023433 | 14895.2 |
| neutral zinc metallopeptidase | FIC06_09880 | Not Available | Positive | 2023580 - 2024443 | 31489.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





