Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8638 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1106923 bp
Thymine Count
1110750 bp
Guanine Count
1175471 bp
Cytosine Count
1171926 bp
Genome Length
4565076 bp
Protein-coding Genes
4383 genes
Non-Coding Genes
214 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease subunit | FIC10_03180 | Not Available | Positive | 666132 - 666818 | 24650.8 |
| abc transporter permease subunit | FIC10_03185 | Not Available | Positive | 666815 - 667531 | 26871.3 |
| histidine abc transporter atp-binding protein hisp | FIC10_03190 | Not Available | Positive | 667539 - 668312 | 28654.8 |
| rpn family recombination-promoting nuclease/putative transposase | FIC10_03195 | Not Available | Positive | 668509 - 669399 | 34181.5 |
| tigr01777 family protein | FIC10_03200 | Not Available | Negative | 669447 - 670340 | 32700.7 |
| dihydroneopterin triphosphate 2'-epimerase | FIC10_03205 | Not Available | Negative | 670361 - 670723 | 14082.8 |
| gsh-dependent disulfide bond oxidoreductase | FIC10_03210 | Not Available | Negative | 670780 - 671427 | 24517.2 |
| glutathione transferase | FIC10_03215 | Not Available | Positive | 671563 - 672207 | 24327.0 |
| phosphodiesterase | FIC10_03220 | Not Available | Positive | 672263 - 672814 | 19992.1 |
| nudix hydrolase yfcd | FIC10_03225 | Not Available | Positive | 672872 - 673414 | 20376.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





