Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8638 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1106923 bp
Thymine Count
1110750 bp
Guanine Count
1175471 bp
Cytosine Count
1171926 bp
Genome Length
4565076 bp
Protein-coding Genes
4383 genes
Non-Coding Genes
214 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| isas1 family transposase | FIC10_23535 | Not Available | Positive | 4555432 - 4555768 | 12781.4 |
| is1-like element is1a family transposase | FIC10_23550 | Not Available | Negative | 4556452 - 4556760 | 12022.9 |
| glutamate decarboxylase | FIC10_23560 | Not Available | Negative | 4557075 - 4557386 | 11507.7 |
| glutamate decarboxylase | FIC10_23575 | Not Available | Negative | 4558002 - 4558304 | 11292.5 |
| dna recombinase | FIC10_23600 | Not Available | Positive | 4559773 - 4560057 | 10522.3 |
| hypothetical protein | FIC10_23605 | Not Available | Negative | 4560058 - 4560331 | 9981.22 |
| hypothetical protein | FIC10_23610 | Not Available | Negative | 4560332 - 4560605 | 9950.2 |
| Trna-glu | Not Available | Not Available | Positive | 4561251 - 4561326 | Not Available |
| Trna-ile | Not Available | Not Available | Positive | 4562076 - 4562152 | Not Available |
| rhs repeat protein | FIC10_23650 | Not Available | Negative | 4562156 - 4562410 | 10096.7 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





