Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8638 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1106923 bp
Thymine Count
1110750 bp
Guanine Count
1175471 bp
Cytosine Count
1171926 bp
Genome Length
4565076 bp
Protein-coding Genes
4383 genes
Non-Coding Genes
214 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | FIC10_23485 | Not Available | Negative | 4551242 - 4551522 | 10076.3 |
| sensor domain-containing phosphodiesterase | FIC10_23490 | Not Available | Positive | 4551635 - 4552026 | 14972.9 |
| Trna-asn | Not Available | Not Available | Positive | 4552010 - 4552084 | Not Available |
| glycosyltransferase | FIC10_23495 | Not Available | Positive | 4552415 - 4552801 | 14807.2 |
| glycosyltransferase family 9 protein | FIC10_23500 | Not Available | Positive | 4552802 - 4553180 | 14429.2 |
| anti-adapter protein irap | FIC10_23505 | Not Available | Positive | 4553252 - 4553512 | 9938.05 |
| ygcg family protein | FIC10_23515 | Not Available | Negative | 4553948 - 4554328 | 14299.1 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | FIC10_23520 | Not Available | Negative | 4554329 - 4554699 | 13703.4 |
| rhs repeat protein | FIC10_23525 | Not Available | Negative | 4554710 - 4555071 | 13790.2 |
| dna recombinase | FIC10_23530 | Not Available | Negative | 4555072 - 4555336 | 9682.68 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





