Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8638 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1106923 bp
Thymine Count
1110750 bp
Guanine Count
1175471 bp
Cytosine Count
1171926 bp
Genome Length
4565076 bp
Protein-coding Genes
4383 genes
Non-Coding Genes
214 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein ninf | FIC10_16435 | Not Available | Negative | 3405139 - 3405333 | 7318.32 |
| nine family protein | FIC10_16440 | Not Available | Negative | 3405306 - 3405482 | 6968.61 |
| protein nind | FIC10_16445 | Not Available | Negative | 3405449 - 3405622 | 7020.36 |
| recombination protein ninb | FIC10_16450 | Not Available | Negative | 3405619 - 3405935 | 11889.1 |
| nitrate/nitrite two-component system sensor histidine kinase narq | FIC10_16455 | Not Available | Positive | 3405936 - 3407243 | 48927.8 |
| multidrug efflux rnd transporter permease acrd | FIC10_16460 | Not Available | Positive | 3407407 - 3410520 | 113054.0 |
| protein ypfm | FIC10_16465 | Not Available | Negative | 3410619 - 3410678 | 2408.02 |
| thr operon leader peptide | FIC10_16470 | Not Available | Positive | 3410951 - 3411016 | 2138.61 |
| bifunctional aspartate kinase/homoserine dehydrogenase i | FIC10_16475 | Not Available | Positive | 3411098 - 3413560 | 89117.4 |
| homoserine kinase | FIC10_16480 | Not Available | Positive | 3413562 - 3414494 | 33611.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





