Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8638 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1106923 bp
Thymine Count
1110750 bp
Guanine Count
1175471 bp
Cytosine Count
1171926 bp
Genome Length
4565076 bp
Protein-coding Genes
4383 genes
Non-Coding Genes
214 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| deda family protein | FIC10_00300 | Not Available | Negative | 60576 - 61340 | 28213.8 |
| arabinose operon transcriptional regulator arac | FIC10_00305 | Not Available | Negative | 61426 - 62304 | 33385.8 |
| ribulokinase | FIC10_00310 | Not Available | Positive | 62643 - 64343 | 61117.6 |
| l-arabinose isomerase | FIC10_00315 | Not Available | Positive | 64354 - 65856 | 56106.2 |
| l-ribulose-5-phosphate 4-epimerase | FIC10_00320 | Not Available | Positive | 66141 - 66836 | 25520.3 |
| dna polymerase ii | FIC10_00325 | Not Available | Positive | 66911 - 69262 | 90057.6 |
| rna polymerase-associated protein rapa | FIC10_00330 | Not Available | Positive | 69428 - 72334 | 109775.0 |
| bifunctional trna pseudouridine(32) synthase/23s rrna pseudouridine(746) synthase rlua | FIC10_00335 | Not Available | Positive | 72346 - 73005 | 24893.1 |
| co-chaperone djla | FIC10_00340 | Not Available | Negative | 73123 - 73938 | 30567.2 |
| lps assembly protein lptd | FIC10_00345 | Not Available | Positive | 74193 - 76547 | 89675.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





