Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8658 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1175161 bp
Thymine Count
1182659 bp
Guanine Count
1216835 bp
Cytosine Count
1214080 bp
Genome Length
4788743 bp
Protein-coding Genes
4502 genes
Non-Coding Genes
164 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Host killer protein | FIC13_21225 | Not Available | Positive | 4364976 - 4365131 | 5784.31 |
| Putative baseplate structural protein | FIC13_21230 | Not Available | Negative | 4365248 - 4365757 | 18821.1 |
| Putative morphogenetic protein pmgg | FIC13_21235 | Not Available | Negative | 4365769 - 4366350 | 20653.6 |
| Tail tube protein | FIC13_21240 | Not Available | Negative | 4366386 - 4367201 | 29242.8 |
| Tail sheath protein gp22 | FIC13_21245 | Not Available | Negative | 4367211 - 4368800 | 57001.5 |
| Major head protein gp23 | FIC13_21250 | Not Available | Negative | 4368861 - 4370460 | 58185.2 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 211 - 326 | Not Available |
| Ncrna_class:rnase_p_rna | Not Available | Not Available | Positive | 593 - 969 | Not Available |
| 30s ribosomal protein s20 | FIC13_00005 | Not Available | Negative | 420 - 683 | 9684.94 |
| duf2575 domain-containing protein | FIC13_00010 | Not Available | Positive | 786 - 1004 | 7899.85 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





