Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8658 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1175161 bp
Thymine Count
1182659 bp
Guanine Count
1216835 bp
Cytosine Count
1214080 bp
Genome Length
4788743 bp
Protein-coding Genes
4502 genes
Non-Coding Genes
164 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Lysis protein rz | FIC13_11065 | Not Available | Positive | 2315533 - 2315994 | 16980.2 |
| Hypothetical protein | FIC13_11070 | Not Available | Positive | 2315982 - 2316134 | 5798.44 |
| hypothetical | FIC13_11075 | Not Available | Positive | 2316094 - 2316195 | 3912.84 |
| Hypothetical protein | FIC13_11080 | Not Available | Positive | 2316451 - 2316651 | 7121.49 |
| Dna-invertase | FIC13_11265 | Not Available | Negative | 2353806 - 2354093 | 10921.3 |
| Phage tail collar domain protein | FIC13_11270 | Not Available | Positive | 2354123 - 2354629 | 17689.0 |
| Tail fiber | FIC13_11275 | Not Available | Positive | 2354632 - 2355042 | 15247.0 |
| hypothetical protein | FIC13_11280 | Not Available | Negative | 2355023 - 2355256 | 8780.08 |
| Tail fiber protein | FIC13_11285 | Not Available | Negative | 2356423 - 2358120 | 54538.5 |
| Putative outer membrane protein lom precursor | FIC13_11290 | Not Available | Negative | 2358185 - 2358784 | 21749.0 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





