Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8658 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1175161 bp
Thymine Count
1182659 bp
Guanine Count
1216835 bp
Cytosine Count
1214080 bp
Genome Length
4788743 bp
Protein-coding Genes
4502 genes
Non-Coding Genes
164 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system baseplate subunit tssg | FIC13_16390 | Not Available | Negative | 3399478 - 3400560 | 40262.1 |
| type vi secretion system baseplate subunit tssf | FIC13_16395 | Not Available | Negative | 3400524 - 3402374 | 71190.0 |
| type vi secretion system baseplate subunit tsse | FIC13_16400 | Not Available | Negative | 3402378 - 3402791 | 15494.0 |
| type vi secretion system contractile sheath large subunit | FIC13_16405 | Not Available | Negative | 3402798 - 3404273 | 55705.0 |
| hypothetical protein | FIC13_16410 | Not Available | Negative | 3404324 - 3404548 | 8411.01 |
| type vi secretion system contractile sheath small subunit | FIC13_16415 | Not Available | Negative | 3404583 - 3405083 | 18052.4 |
| is1 family transposase | FIC13_16420 | Not Available | Positive | 3405257 - 3405402 | 5698.89 |
| hypothetical protein | FIC13_16425 | Not Available | Positive | 3405964 - 3406143 | 6638.46 |
| resolvase | FIC13_16430 | Not Available | Negative | 3406259 - 3406903 | 24491.3 |
| peptidyl-arginine deiminase | FIC13_16435 | Not Available | Positive | 3407284 - 3407946 | 24021.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





