Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8658 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1175161 bp
Thymine Count
1182659 bp
Guanine Count
1216835 bp
Cytosine Count
1214080 bp
Genome Length
4788743 bp
Protein-coding Genes
4502 genes
Non-Coding Genes
164 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xre family transcriptional regulator | FIC13_12700 | Not Available | Positive | 2655835 - 2656336 | 19337.9 |
| integrase | FIC13_12705 | Not Available | Negative | 2656475 - 2657716 | 46734.4 |
| Tmrna,resume consensus sequence (at 83): aatagtcgcaaacgacga | Not Available | Not Available | Positive | 2657922 - 2658284 | Not Available |
| ssra-binding protein smpb | FIC13_12715 | Not Available | Negative | 2658499 - 2658981 | 18270.1 |
| type ii toxin-antitoxin system toxin rata | FIC13_12720 | Not Available | Positive | 2659113 - 2659589 | 17743.7 |
| rnfh family protein | FIC13_12725 | Not Available | Positive | 2659579 - 2659869 | 10790.0 |
| outer membrane protein assembly factor bame | FIC13_12730 | Not Available | Negative | 2659931 - 2660272 | 12302.8 |
| dna repair protein recn | FIC13_12735 | Not Available | Negative | 2660421 - 2662082 | 61400.1 |
| nad(+) kinase | FIC13_12740 | Not Available | Negative | 2662168 - 2663046 | 32568.3 |
| nucleotide exchange factor grpe | FIC13_12745 | Not Available | Positive | 2663169 - 2663762 | 21813.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





