Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8700 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1164982 bp
Thymine Count
1164049 bp
Guanine Count
1195743 bp
Cytosine Count
1211620 bp
Genome Length
4736394 bp
Protein-coding Genes
4361 genes
Non-Coding Genes
270 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyridoxal phosphate-dependent aminotransferase family protein | FIC21_13915 | Not Available | Positive | 2879684 - 2880477 | 28082.4 |
| hypothetical protein | FIC21_13920 | Not Available | Positive | 2880478 - 2880694 | 7658.07 |
| appa family phytase/histidine-type acid phosphatase | FIC21_13925 | Not Available | Negative | 2880809 - 2882107 | 47032.5 |
| cytochrome bd-ii oxidase subunit cbdx | FIC21_13930 | Not Available | Negative | 2882187 - 2882279 | 3597.68 |
| cytochrome d ubiquinol oxidase subunit ii | FIC21_13935 | Not Available | Negative | 2882292 - 2883428 | 42426.3 |
| cytochrome bd-ii oxidase subunit 1 | FIC21_13940 | Not Available | Negative | 2883440 - 2884984 | 57996.3 |
| hydrogenase expression/formation protein | FIC21_13945 | Not Available | Negative | 2885118 - 2885975 | 31432.5 |
| hydrogenase-1 operon protein hyae | FIC21_13950 | Not Available | Negative | 2885972 - 2886370 | 14880.6 |
| hydrogenase 1 maturation protease | FIC21_13955 | Not Available | Negative | 2886367 - 2886954 | 21547.7 |
| ni/fe-hydrogenase b-type cytochrome subunit | FIC21_13960 | Not Available | Negative | 2886951 - 2887658 | 27598.8 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





