Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8767 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1141735 bp
Thymine Count
1148770 bp
Guanine Count
1178331 bp
Cytosine Count
1184453 bp
Genome Length
4653289 bp
Protein-coding Genes
4445 genes
Non-Coding Genes
185 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Bacteriophage tail tape measure protein | FIC29_12585 | Not Available | Positive | 2567510 - 2570743 | 117809.0 |
| Putative minor tail protein | FIC29_12590 | Not Available | Positive | 2570736 - 2571074 | 13256.5 |
| Tail component | FIC29_12595 | Not Available | Positive | 2571074 - 2571772 | 25666.9 |
| Tail fiber component | FIC29_12600 | Not Available | Positive | 2571778 - 2572521 | 28292.4 |
| Tail component | FIC29_12605 | Not Available | Positive | 2572458 - 2573090 | 21866.5 |
| Host specificity protein | FIC29_12610 | Not Available | Positive | 2573151 - 2575025 | 68941.1 |
| Transposase is1 | FIC29_17735 | Not Available | Negative | 3580428 - 3580498 | 2357.77 |
| Terminase large subunit | FIC29_17740 | Not Available | Positive | 3580555 - 3580743 | 6725.05 |
| Portal protein | FIC29_17745 | Not Available | Positive | 3580891 - 3582117 | 46543.4 |
| Capsid protease | FIC29_17750 | Not Available | Positive | 3582110 - 3582709 | 22431.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




