Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8798 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1156471 bp
Thymine Count
1157353 bp
Guanine Count
1200358 bp
Cytosine Count
1201446 bp
Genome Length
4715725 bp
Protein-coding Genes
4323 genes
Non-Coding Genes
259 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| catecholate siderophore receptor fiu | FIB81_13810 | Not Available | Positive | 2889507 - 2891789 | 81960.5 |
| pkhd-type hydroxylase ybix | FIB81_13815 | Not Available | Positive | 2891831 - 2892508 | 25530.2 |
| c4-type zinc finger protein ybii | FIB81_13820 | Not Available | Positive | 2892582 - 2892848 | 9772.33 |
| duf1471 domain-containing protein | FIB81_13825 | Not Available | Positive | 2893113 - 2893373 | 8568.2 |
| malate/lactate/ureidoglycolate dehydrogenase | FIB81_13830 | Not Available | Negative | 2893601 - 2894686 | 38875.2 |
| dna-binding protein ybib | FIB81_13835 | Not Available | Negative | 2894827 - 2895789 | 35050.7 |
| atp-dependent dna helicase ding | FIB81_13840 | Not Available | Negative | 2895817 - 2897967 | 81426.8 |
| n-glycosidase ybia | FIB81_13845 | Not Available | Positive | 2898087 - 2898569 | 18673.3 |
| atp-dependent rna helicase rhle | FIB81_13850 | Not Available | Negative | 2898801 - 2900165 | 50022.4 |
| dna-binding transcriptional regulator cecr | FIB81_13855 | Not Available | Positive | 2900394 - 2901065 | 24965.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





