Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8798 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1156471 bp
Thymine Count
1157353 bp
Guanine Count
1200358 bp
Cytosine Count
1201446 bp
Genome Length
4715725 bp
Protein-coding Genes
4323 genes
Non-Coding Genes
259 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf416 family protein | FIB81_13505 | Not Available | Positive | 2813373 - 2813963 | 22613.9 |
| dna-binding protein hu-alpha | FIB81_13510 | Not Available | Positive | 2814150 - 2814422 | 9535.51 |
| duf1481 domain-containing protein | FIB81_13515 | Not Available | Positive | 2814435 - 2815130 | 26352.9 |
| zinc resistance sensor/chaperone zrap | FIB81_13520 | Not Available | Negative | 2815132 - 2815557 | 15230.3 |
| two-component system sensor histidine kinase zras | FIB81_13525 | Not Available | Positive | 2815795 - 2817171 | 50520.1 |
| sigma-54-dependent response regulator transcription factor zrar | FIB81_13530 | Not Available | Positive | 2817168 - 2818493 | 48385.4 |
| phosphoribosylamine--glycine ligase | FIB81_13535 | Not Available | Negative | 2818490 - 2819779 | 46016.0 |
| bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolase | FIB81_13540 | Not Available | Negative | 2819791 - 2821380 | 57361.4 |
| aida-i family autotransporter yfal | FIB81_13545 | Not Available | Positive | 2822062 - 2825796 | 130860.0 |
| bifunctional 3-demethylubiquinone 3-o-methyltransferase/2-octaprenyl-6-hydroxy phenol methylase | FIB81_13550 | Not Available | Negative | 2825924 - 2826646 | 26587.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





