Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8798 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1156471 bp
Thymine Count
1157353 bp
Guanine Count
1200358 bp
Cytosine Count
1201446 bp
Genome Length
4715725 bp
Protein-coding Genes
4323 genes
Non-Coding Genes
259 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide chain release factor h | FIB81_12590 | Not Available | Negative | 2641569 - 2642183 | 22926.2 |
| rna ligase rtcb family protein | FIB81_12595 | Not Available | Negative | 2642180 - 2643346 | 42590.9 |
| gnat family n-acetyltransferase | FIB81_12600 | Not Available | Negative | 2643565 - 2644017 | 17561.2 |
| dna polymerase iv | FIB81_12605 | Not Available | Negative | 2644014 - 2645069 | 39491.2 |
| putative lateral flagellar export/assembly protein lafu | FIB81_12610 | Not Available | Negative | 2645140 - 2645910 | 28482.3 |
| flagellar type iii secretion system protein flha | FIB81_12615 | Not Available | Positive | 2645870 - 2647609 | 63167.1 |
| type ii toxin-antitoxin system hica family toxin | FIB81_12620 | Not Available | Positive | 2647714 - 2647992 | 10187.3 |
| type ii toxin-antitoxin system hicb family antitoxin | FIB81_12625 | Not Available | Positive | 2647985 - 2648341 | 13409.8 |
| nlpc/p60 family protein | FIB81_12630 | Not Available | Negative | 2648398 - 2649171 | 29717.5 |
| type ii toxin-antitoxin system antitoxin dinj | FIB81_12635 | Not Available | Positive | 2649357 - 2649617 | 9392.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





