Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8798 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1156471 bp
Thymine Count
1157353 bp
Guanine Count
1200358 bp
Cytosine Count
1201446 bp
Genome Length
4715725 bp
Protein-coding Genes
4323 genes
Non-Coding Genes
259 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphonate abc transporter, permease protein phne | FIB81_12320 | Not Available | Negative | 2596096 - 2596875 | 28385.3 |
| phosphonate abc transporter substrate-binding protein | FIB81_12325 | Not Available | Negative | 2597000 - 2598016 | 37372.6 |
| phosphonate abc transporter atp-binding protein | FIB81_12330 | Not Available | Negative | 2598041 - 2598829 | 29395.3 |
| voc family metalloprotein yjdn | FIB81_12335 | Not Available | Negative | 2598962 - 2599405 | 16156.2 |
| phna family protein | FIB81_12340 | Not Available | Negative | 2599565 - 2599900 | 12345.7 |
| clamp-binding protein crfc | FIB81_12345 | Not Available | Positive | 2600302 - 2602530 | 84158.5 |
| hypothetical protein | FIB81_12350 | Not Available | Positive | 2602527 - 2603405 | 32887.7 |
| glycine betaine/l-proline transporter prop | FIB81_12355 | Not Available | Positive | 2603669 - 2605171 | 54836.1 |
| lpxt activity modulator pmrr | FIB81_12360 | Not Available | Positive | 2605283 - 2605372 | 3449.23 |
| two-component system sensor histidine kinase pmrb | FIB81_12365 | Not Available | Negative | 2605348 - 2606439 | 40924.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





