Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8798 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1156471 bp
Thymine Count
1157353 bp
Guanine Count
1200358 bp
Cytosine Count
1201446 bp
Genome Length
4715725 bp
Protein-coding Genes
4323 genes
Non-Coding Genes
259 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| zinc abc transporter permease subunit znub | FIB81_12020 | Not Available | Positive | 2540825 - 2541610 | 27762.5 |
| holliday junction branch migration dna helicase ruvb | FIB81_12025 | Not Available | Negative | 2541757 - 2542767 | 37176.0 |
| holliday junction branch migration protein ruva | FIB81_12030 | Not Available | Negative | 2542776 - 2543387 | 22087.0 |
| hypothetical protein | FIB81_12035 | Not Available | Negative | 2543526 - 2543591 | 2699.43 |
| yebb family permuted papain-like enzyme | FIB81_12040 | Not Available | Positive | 2543662 - 2544264 | 22676.2 |
| crossover junction endodeoxyribonuclease ruvc | FIB81_12045 | Not Available | Negative | 2544266 - 2544787 | 18747.9 |
| yebc/pmpr family dna-binding transcriptional regulator | FIB81_12050 | Not Available | Negative | 2544822 - 2545562 | 26438.1 |
| dihydroneopterin triphosphate diphosphatase | FIB81_12055 | Not Available | Negative | 2545591 - 2546043 | 17222.5 |
| aspartate--trna ligase | FIB81_12060 | Not Available | Negative | 2546036 - 2547808 | 65873.2 |
| hydrolase | FIB81_12065 | Not Available | Positive | 2548118 - 2548684 | 20450.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





