Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8798 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1156471 bp
Thymine Count
1157353 bp
Guanine Count
1200358 bp
Cytosine Count
1201446 bp
Genome Length
4715725 bp
Protein-coding Genes
4323 genes
Non-Coding Genes
259 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrogenase 4 subunit hyfa | FIB81_11265 | Not Available | Negative | 2392012 - 2392629 | 22218.6 |
| thioredoxin-dependent thiol peroxidase | FIB81_11270 | Not Available | Negative | 2392882 - 2393352 | 17634.9 |
| glycine cleavage system transcriptional repressor | FIB81_11275 | Not Available | Negative | 2393352 - 2393924 | 20769.8 |
| 4-hydroxy-tetrahydrodipicolinate synthase | FIB81_11280 | Not Available | Positive | 2394070 - 2394948 | 31285.9 |
| outer membrane protein assembly factor bamc | FIB81_11285 | Not Available | Positive | 2394965 - 2395999 | 36844.5 |
| phosphoribosylaminoimidazolesuccinocarboxamide synthase | FIB81_11290 | Not Available | Positive | 2396212 - 2396925 | 26996.5 |
| antitoxin | FIB81_11295 | Not Available | Positive | 2397079 - 2397306 | 8499.05 |
| trna(fmet)-specific endonuclease vapc | FIB81_11300 | Not Available | Positive | 2397306 - 2397704 | 14895.2 |
| neutral zinc metallopeptidase | FIB81_11305 | Not Available | Positive | 2397851 - 2398714 | 31462.0 |
| trna(met) cytidine acetyltransferase | FIB81_11310 | Not Available | Positive | 2398729 - 2400744 | 74737.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





