Escherichia coli strain KCJK8829

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain KCJK8829 is a Gram-negative, rod-shaped bacterium that is facultatively anaerobic and exhibits mobility due to its flagella. This strain is primarily host-associated and demonstrates a free-living biotic relationship. It is mesophilic with an optimal growth temperature of 37°C. KCJK8829 has a single replicon and is characterized by having two membranes. This strain is associated with a wide range of hosts, including Homo sapiens (humans), Gallus gallus (chickens), Bos taurus (cattle), and various other vertebrates and invertebrates. Such a diverse host range indicates its ecological versatility and potential for interaction with different organisms in various environments. E. coli strain KCJK8829 is notably pathogenic to humans, being linked to several health effects. It has been implicated in urinary tract infections (UTIs), gastrointestinal infections, and more severe conditions like neonatal meningitis and hemolytic uremic syndrome (HUS). The strain's role in these diseases highlights its potential impact on public health and underscores the importance of monitoring and understanding its pathogenicity. The presence of E. coli strain KCJK8829 in diverse habitats and its association with a variety of hosts suggest that it plays a significant role in both human health and disease dynamics. This highlights the need for continuous research into its pathogenic mechanisms and ecological presence, given its implications for zoonotic transmission and food safety.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain KCJK8829

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain KCJK8829
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain KCJK8829

Gene Summary

Adenine Count

1162164 bp

Thymine Count

1162852 bp

Guanine Count

1211230 bp

Cytosine Count

1194538 bp

Genome Length

4730784 bp

Protein-coding Genes

4311 genes

Non-Coding Genes

282 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
3-deoxy-8-phosphooctulonate synthaseFIB34_03045Not AvailablePositive644349 - 64520330834.5
small toxic polypeptide ldra/ldrcFIB34_03050Not AvailableNegative645352 - 6454593984.01
small toxic polypeptide ldrbFIB34_03060Not AvailableNegative645887 - 6459943971.95
small toxic polypeptide ldra/ldrcFIB34_03070Not AvailableNegative646421 - 6465284001.97
sodium-potassium/proton antiporter chaaFIB34_03080Not AvailableNegative646933 - 64803339166.9
putative cation transport regulator chabFIB34_03085Not AvailablePositive648303 - 6485338931.15
gamma-glutamylcyclotransferaseFIB34_03090Not AvailablePositive648691 - 64938625476.7
dsre/f sulfur relay family protein ychnFIB34_03095Not AvailableNegative649430 - 64978312693.5
inverse autotransporter invasin ychoFIB34_03100Not AvailablePositive649968 - 65136252105.6
two-component system response regulator narlFIB34_03105Not AvailableNegative651363 - 65201323884.3

Displaying genes 781 – 790 of 4593 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

23 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm00007131,5-anhydro-D-fructoseC6H10O5Chemical structure of 1,5-anhydro-D-fructoseNot available
Average162.1406Da
Monoisotopic162.05282343Da
BASm0001086scyllo-inososeC6H10O6Chemical structure of scyllo-inososeNot available
Average178.14Da
Monoisotopic178.0477381Da
BASm0001111keto-D-tagaturonateC6H9O7Chemical structure of keto-D-tagaturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm00022871,5-anhydro-D-mannitolC6H12O5Chemical structure of 1,5-anhydro-D-mannitolNot available
Average164.157Da
Monoisotopic164.0684735Da
BASm00023634-isopropenyl-7-methyloxepan-2-oneC10H16O2Chemical structure of 4-isopropenyl-7-methyloxepan-2-oneNot available
Average168.236Da
Monoisotopic168.1150298Da
BASm0002396scyllo-inosineC6H10O6Chemical structure of scyllo-inosineNot available
Average178.14Da
Monoisotopic178.047738042Da
BASm00028782-oxo-3-sulfanylpropanoateC3H3O3SChemical structure of 2-oxo-3-sulfanylpropanoateNot available
Average119.11Da
Monoisotopic118.9808387Da
BASm0002909O-acetyl-L-homoserineC6H11NO4Chemical structure of O-acetyl-L-homoserine7540-67-2
Average161.1558Da
Monoisotopic161.0688078Da

Displaying 1–10 of 23 metabolites

Health Effects

Health ConditionRelationReference
Gi diseaseCausesPMC11149725
UtisCausesPMC11434687
Colorectal cancerCausesPMC12198655
Pyogenic liver abscessesCausesPMC12392612
UtiCausesPMC13014981
ColibacillosisCausesPMC13255289
Enteric infectionsCausesPMC13255289
Foodborne infectionsCausesPMC13255289
Clinical mastitisCausesPMC13293316
DiarrheaCausesPMC3035056

Displaying health effects 1 – 10 of 103 in total