Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8857 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157751 bp
Thymine Count
1158331 bp
Guanine Count
1193775 bp
Cytosine Count
1202692 bp
Genome Length
4712549 bp
Protein-coding Genes
4474 genes
Non-Coding Genes
214 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ferredoxin-type protein napg | FIB23_24080 | Not Available | Positive | 4697727 - 4698233 | 18216.9 |
| rhs repeat-associated core domain-containing protein | FIB23_24085 | Not Available | Positive | 4698234 - 4698739 | 18891.1 |
| hypothetical protein | FIB23_24090 | Not Available | Positive | 4698743 - 4699069 | 12558.1 |
| transcriptional regulator nrdr | FIB23_24100 | Not Available | Positive | 4699233 - 4699544 | 11940.5 |
| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase | FIB23_24105 | Not Available | Positive | 4699548 - 4699717 | 6418.64 |
| type i toxin-antitoxin system hok family toxin | FIB23_24120 | Not Available | Negative | 4700489 - 4700641 | 5592.11 |
| type iii secretion system effector espx1 | FIB23_24125 | Not Available | Negative | 4700756 - 4701159 | 15545.8 |
| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribd | FIB23_24130 | Not Available | Positive | 4701616 - 4702064 | 15947.2 |
| duf1983 domain-containing protein | FIB23_24135 | Not Available | Negative | 4702481 - 4702882 | 14134.8 |
| duf1983 domain-containing protein | FIB23_24140 | Not Available | Negative | 4702883 - 4703284 | 14113.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





