Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8875 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1167382 bp
Thymine Count
1159856 bp
Guanine Count
1203146 bp
Cytosine Count
1205883 bp
Genome Length
4736267 bp
Protein-coding Genes
4508 genes
Non-Coding Genes
245 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Umud | FIB50_05555 | Not Available | Positive | 1127134 - 1127350 | 8119.69 |
| Umud | FIB50_05560 | Not Available | Positive | 1127290 - 1127421 | 4998.87 |
| Penicillin-binding protein 6b | FIB50_05565 | Not Available | Positive | 1127765 - 1128931 | 43347.5 |
| Transposase | FIB50_08840 | Not Available | Positive | 1817165 - 1817331 | 6030.31 |
| Methyltransferase | FIB50_08845 | Not Available | Negative | 1817721 - 1818077 | 13620.4 |
| Lygf | FIB50_08850 | Not Available | Negative | 1818074 - 1818496 | 16256.5 |
| Attl | Not Available | Not Available | Positive | 1818184 - 1818196 | Not Available |
| Replication protein | FIB50_08855 | Not Available | Negative | 1818537 - 1819502 | 36962.9 |
| hypothetical protein | FIB50_08860 | Not Available | Negative | 1819483 - 1820004 | 19925.9 |
| Putative cro anti-repressor | FIB50_08865 | Not Available | Negative | 1819988 - 1820218 | 8578.22 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





