Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8887 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1129785 bp
Thymine Count
1128887 bp
Guanine Count
1184966 bp
Cytosine Count
1186536 bp
Genome Length
4630174 bp
Protein-coding Genes
4472 genes
Non-Coding Genes
214 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor rpoh | FIB35_03225 | Not Available | Positive | 648632 - 649486 | 32470.6 |
| branched-chain amino acid abc transporter substrate-binding protein | FIB35_03230 | Not Available | Positive | 649757 - 650860 | 39108.6 |
| aspartate 1-decarboxylase autocleavage activator panm | FIB35_03235 | Not Available | Negative | 651060 - 651443 | 14545.3 |
| high-affinity branched-chain amino acid abc transporter substrate-binding protein livk | FIB35_03240 | Not Available | Positive | 651867 - 652976 | 39380.9 |
| high-affinity branched-chain amino acid abc transporter permease livh | FIB35_03245 | Not Available | Positive | 653024 - 653950 | 32984.4 |
| high-affinity branched-chain amino acid abc transporter permease livm | FIB35_03250 | Not Available | Positive | 653947 - 655224 | 46320.2 |
| high-affinity branched-chain amino acid abc transporter atp-binding protein livg | FIB35_03255 | Not Available | Positive | 655221 - 655988 | 28428.7 |
| high-affinity branched-chain amino acid abc transporter atp-binding protein livf | FIB35_03260 | Not Available | Positive | 655990 - 656703 | 26297.9 |
| extracellular solute-binding protein | FIB35_03265 | Not Available | Positive | 657100 - 657518 | 15198.0 |
| terc family protein | FIB35_03270 | Not Available | Positive | 657993 - 659576 | 59439.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





