Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8887 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1129785 bp
Thymine Count
1128887 bp
Guanine Count
1184966 bp
Cytosine Count
1186536 bp
Genome Length
4630174 bp
Protein-coding Genes
4472 genes
Non-Coding Genes
214 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cys-trna(pro)/cys-trna(cys) deacylase ybak | FIB35_02910 | Not Available | Negative | 583739 - 584218 | 17093.9 |
| duf3313 domain-containing protein | FIB35_02920 | Not Available | Positive | 584748 - 585369 | 22764.1 |
| is200/is605 family element transposase accessory protein tnpb | FIB35_02930 | Not Available | Positive | 585901 - 587109 | 45743.1 |
| bene family transporter ydco | FIB35_02935 | Not Available | Negative | 587149 - 588363 | 42117.8 |
| helix-turn-helix domain-containing protein | FIB35_02940 | Not Available | Positive | 588416 - 588952 | 19732.4 |
| 23s rrna 5-hydroxycytidine c2501 synthase | FIB35_02945 | Not Available | Positive | 589025 - 590986 | 72705.9 |
| duf2554 family protein | FIB35_02950 | Not Available | Negative | 591078 - 591308 | 8709.32 |
| type ii toxin-antitoxin system mrna interferase toxin hica | FIB35_02955 | Not Available | Positive | 591530 - 591706 | 6782.3 |
| type ii toxin-antitoxin system antitoxin hicb | FIB35_02960 | Not Available | Positive | 591752 - 592168 | 15247.5 |
| plp-dependent aminotransferase family protein | FIB35_02965 | Not Available | Positive | 592247 - 593653 | 52795.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





