Escherichia coli strain KCJK8887

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain KCJK8887 is a Gram-negative, rod-shaped bacterium that is facultatively anaerobic and exhibits mobility due to the presence of flagella. This strain thrives optimally at 37°C and falls within the mesophilic temperature range. It is characterized by a unique habitat association with various hosts, including Homo sapiens, Gallus gallus, Bos taurus, and multiple other vertebrates and invertebrates. The bacterium forms arrangements in pairs or singles and possesses a single replicon and two membranes. As a free-living organism, E. coli strain KCJK8887 interacts with a diverse array of host species, which may contribute to its pathogenic potential. It is known to cause a wide range of health effects in humans, including urinary tract infections (UTIs), gastrointestinal infections, and severe conditions such as neonatal meningitis and hemolytic uremic syndrome (HUS). The extensive list of diseases associated with this strain underscores its pathogenicity and the public health significance it holds. Ecologically, the ability of E. coli strain KCJK8887 to colonize various hosts suggests a complex biotic relationship, allowing for its survival and propagation in diverse environments. This adaptability may facilitate the transmission of virulence factors across different species, thereby influencing the epidemiology of infections linked to this strain. Understanding the interactions between E. coli KCJK8887 and its numerous hosts can provide insights into controlling the spread of associated diseases.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain KCJK8887

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain KCJK8887
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain KCJK8887


Gene Summary

Adenine Count

1129785 bp

Thymine Count

1128887 bp

Guanine Count

1184966 bp

Cytosine Count

1186536 bp

Genome Length

4630174 bp

Protein-coding Genes

4472 genes

Non-Coding Genes

214 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
alternative ribosome-rescue factor aFIB35_02180Not AvailableNegative468005 - 4682238171.86
zn(2+)-responsive transcriptional regulatorFIB35_02185Not AvailableNegative468279 - 46870416180.4
duf1992 domain-containing proteinFIB35_02190Not AvailableNegative468715 - 46908313945.5
50s ribosomal protein l17FIB35_02195Not AvailableNegative469190 - 46957314365.4
dna-directed rna polymerase subunit alphaFIB35_02200Not AvailableNegative469614 - 47060336513.9
30s ribosomal protein s4FIB35_02205Not AvailableNegative470629 - 47124923470.5
30s ribosomal protein s11FIB35_02210Not AvailableNegative471283 - 47167213845.7
30s ribosomal protein s13FIB35_02215Not AvailableNegative471689 - 47204513100.2
50s ribosomal protein l36FIB35_02220Not AvailableNegative472192 - 4723084364.59
preprotein translocase subunit secyFIB35_02225Not AvailableNegative472340 - 47367148514.7

Displaying genes 571 – 580 of 4686 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Gi diseaseCausesPMC11149725
UtisCausesPMC11434687
Colorectal cancerCausesPMC12198655
Pyogenic liver abscessesCausesPMC12392612
UtiCausesPMC13014981
ColibacillosisCausesPMC13255289
Enteric infectionsCausesPMC13255289
Foodborne infectionsCausesPMC13255289
Clinical mastitisCausesPMC13293316
DiarrheaCausesPMC3035056

Displaying health effects 1 – 10 of 103 in total