Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8887 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1129785 bp
Thymine Count
1128887 bp
Guanine Count
1184966 bp
Cytosine Count
1186536 bp
Genome Length
4630174 bp
Protein-coding Genes
4472 genes
Non-Coding Genes
214 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FIB35_23935 | Not Available | Negative | 4612555 - 4612969 | 15489.2 |
| cyclic di-gmp phosphodiesterase | FIB35_23940 | Not Available | Negative | 4612970 - 4613383 | 15836.5 |
| duf726 domain-containing protein | FIB35_23950 | Not Available | Negative | 4613826 - 4614208 | 14499.3 |
| sulfite exporter taue/safe family protein | FIB35_23965 | Not Available | Positive | 4614618 - 4614916 | 10403.5 |
| is1 family transposase | FIB35_23975 | Not Available | Negative | 4615313 - 4615413 | 3738.57 |
| dna recombinase | FIB35_23980 | Not Available | Negative | 4615414 - 4615678 | 9682.68 |
| glycosyltransferase family 2 protein | FIB35_23985 | Not Available | Positive | 4615809 - 4616199 | 14113.7 |
| type ii toxin-antitoxin system antitoxin dinj | FIB35_23990 | Not Available | Negative | 4616262 - 4616522 | 9406.33 |
| glycosyltransferase | FIB35_23995 | Not Available | Negative | 4616591 - 4616979 | 14792.0 |
| hypothetical protein | FIB35_24005 | Not Available | Negative | 4617368 - 4617754 | 15538.1 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





