Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8887 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1129785 bp
Thymine Count
1128887 bp
Guanine Count
1184966 bp
Cytosine Count
1186536 bp
Genome Length
4630174 bp
Protein-coding Genes
4472 genes
Non-Coding Genes
214 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| isas1 family transposase | FIB35_23880 | Not Available | Negative | 4608259 - 4608700 | 16479.7 |
| hypothetical protein | FIB35_23885 | Not Available | Positive | 4608701 - 4609136 | 16582.1 |
| polysaccharide biosynthesis family protein | FIB35_23890 | Not Available | Negative | 4609137 - 4609332 | 7240.24 |
| pyridoxal-phosphate-dependent/plp-dependent aminotransferase | FIB35_23895 | Not Available | Negative | 4609325 - 4609570 | 9234.12 |
| alpha-amylase | FIB35_23900 | Not Available | Positive | 4609571 - 4609788 | 8100.47 |
| hypothetical protein | FIB35_23910 | Not Available | Positive | 4611048 - 4611161 | 4013.06 |
| cold shock protein ydfk | FIB35_23915 | Not Available | Positive | 4611230 - 4611294 | 2571.26 |
| hth-type transcriptional regulator | FIB35_23920 | Not Available | Positive | 4611360 - 4611650 | 11033.5 |
| pyridoxal-5'-phosphate-dependent protein | FIB35_23925 | Not Available | Negative | 4611818 - 4612137 | 12136.4 |
| hypothetical protein | FIB35_23930 | Not Available | Negative | 4612138 - 4612554 | 14617.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





