Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8887 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1129785 bp
Thymine Count
1128887 bp
Guanine Count
1184966 bp
Cytosine Count
1186536 bp
Genome Length
4630174 bp
Protein-coding Genes
4472 genes
Non-Coding Genes
214 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome b | FIB35_23830 | Not Available | Negative | 4603682 - 4604144 | 16889.8 |
| hypothetical protein | FIB35_23835 | Not Available | Negative | 4604148 - 4604612 | 16864.8 |
| molecular chaperone | FIB35_23840 | Not Available | Positive | 4604613 - 4605075 | 17058.8 |
| mfs transporter | FIB35_23845 | Not Available | Positive | 4605076 - 4605537 | 17788.8 |
| elongation factor tu | FIB35_23850 | Not Available | Negative | 4605538 - 4605998 | 16900.0 |
| hypothetical protein | FIB35_23855 | Not Available | Positive | 4605999 - 4606457 | 16369.9 |
| duf4049 domain-containing protein | FIB35_23860 | Not Available | Positive | 4606458 - 4606913 | 17072.4 |
| hypothetical protein | FIB35_23865 | Not Available | Positive | 4607006 - 4607364 | 12957.5 |
| helix-turn-helix transcriptional regulator | FIB35_23870 | Not Available | Negative | 4607365 - 4607811 | 17214.5 |
| duf2502 domain-containing protein | FIB35_23875 | Not Available | Negative | 4607812 - 4608067 | 9968.97 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





