Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8887 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1129785 bp
Thymine Count
1128887 bp
Guanine Count
1184966 bp
Cytosine Count
1186536 bp
Genome Length
4630174 bp
Protein-coding Genes
4472 genes
Non-Coding Genes
214 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FIB35_23725 | Not Available | Positive | 4593411 - 4593621 | 7492.98 |
| alpha amylase | FIB35_23730 | Not Available | Positive | 4593634 - 4593979 | 13649.3 |
| aldehyde dehydrogenase family protein | FIB35_23735 | Not Available | Negative | 4593980 - 4594424 | 16212.2 |
| transcriptional regulator beti | FIB35_23740 | Not Available | Negative | 4594438 - 4594538 | 3658.42 |
| d-galactarate dehydratase | FIB35_23745 | Not Available | Negative | 4594539 - 4594663 | 4646.47 |
| ferritin-like domain-containing protein | FIB35_23750 | Not Available | Positive | 4595098 - 4595583 | 18010.4 |
| lipopolysaccharide glucosyltransferase rfaj | FIB35_23755 | Not Available | Negative | 4595635 - 4596123 | 18426.3 |
| fumarate hydratase fumd | FIB35_23760 | Not Available | Positive | 4596530 - 4596701 | 6609.2 |
| duf4049 domain-containing protein | FIB35_23770 | Not Available | Negative | 4597442 - 4597754 | 11865.9 |
| duf2633 family protein | FIB35_23775 | Not Available | Positive | 4597960 - 4598133 | 6856.35 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





