Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8887 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1129785 bp
Thymine Count
1128887 bp
Guanine Count
1184966 bp
Cytosine Count
1186536 bp
Genome Length
4630174 bp
Protein-coding Genes
4472 genes
Non-Coding Genes
214 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FIB35_23540 | Not Available | Negative | 4579037 - 4579102 | 2277.8 |
| cold-shock protein | FIB35_23545 | Not Available | Negative | 4579105 - 4579293 | 7141.65 |
| cold shock protein cspi | FIB35_23550 | Not Available | Negative | 4579304 - 4579516 | 7684.14 |
| type 1 fimbrial protein | FIB35_23555 | Not Available | Negative | 4579728 - 4580270 | 19061.6 |
| is1 family transposase | FIB35_23560 | Not Available | Positive | 4580274 - 4580382 | 4160.06 |
| transposase domain-containing protein | FIB35_23570 | Not Available | Negative | 4580812 - 4580907 | 3673.46 |
| type 1 fimbriae regulatory protein fime | FIB35_23575 | Not Available | Negative | 4580908 - 4581415 | 19685.6 |
| udp-glucuronate:lps(hepiii) glycosyltransferase | FIB35_23580 | Not Available | Negative | 4581541 - 4582113 | 21713.8 |
| fimbrial subunit elfa | FIB35_23585 | Not Available | Negative | 4582170 - 4582709 | 18680.8 |
| hypothetical protein | FIB35_23590 | Not Available | Positive | 4582784 - 4583027 | 9196.14 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





